This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001K2NF.1

Uganda/LOC_001K2NF.1/2025-11-21
M. G. Onyango

Texas Tech University, Biology

Sample details

Collection date
2025-11-21
Earliest release date
2026-10-04
Sampling location
Uganda
Isolate name
BX3.71_88_A5_F-Pan_Nairo_F

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-10-04
INSDC accession L

Host

Host

Submission details

Submission ID
PZ713914.1.L
Submitting group
Date submitted
2026-10-05 03:03:16 UTC
Date released
2026-10-05 03:03:27 UTC

Files

Annotations

Alignment and QC

Total SNPs L
87
Total unknown nucs L
15
Length L
408 (3.25%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • C1024T
  • C1036G
  • G1046T
  • T1048C
  • C1051T
  • G1061C
  • A1064C
  • A1066T
  • T1075C
  • A1076G
  • G1081T
  • C1082T
  • G1096A
  • G1106C
  • C1111T
  • A1120G
  • A1123C
  • C1132T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

RdRp

  • RdRp:A324S
  • RdRp:G329R
  • RdRp:I330L
  • RdRp:M334V
  • RdRp:Q335H
  • RdRp:D344H
  • RdRp:N362M
  • RdRp:K382N
  • RdRp:A399S
  • RdRp:R401T
  • RdRp:C408W
  • RdRp:S409V
  • RdRp:Q415L
  • RdRp:I416V
  • RdRp:N417T
  • RdRp:L419V
  • RdRp:Q420H
  • RdRp:R424K
  • RdRp:S427N
  • RdRp:D440H
Deletions
N/A
Insertions
N/A

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